Exiguobacterium aurantiacum strain NCTC13163

Gram-positiveRodaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Family_XII

Genus

Exiguobacterium

Description

Exiguobacterium aurantiacum strain NCTC13163 is a Gram-positive, rod-shaped bacterium characterized by its aerobic oxygen requirement and the presence of flagella. This strain is mesophilic, with an optimal growth temperature of 29°C, indicating its preference for moderate temperature conditions. The strain has a single replicon, which is typical for many bacterial species, and its genomic data can be accessed through the accession number UGGP00000000.1. Notably, Exiguobacterium aurantiacum has been associated with the host Solanum lycopersicum, commonly known as the tomato plant. This relationship suggests potential ecological roles, including interactions that could influence plant health or growth. The presence of flagella in this strain may facilitate motility, possibly aiding its colonization of plant surfaces or roots, which could be significant in establishing its ecological niche. Understanding the specific interactions between Exiguobacterium aurantiacum and its host may provide insights into its ecological impact and potential applications in agriculture or biotechnology. Further research could elucidate the mechanisms by which this bacterium interacts with tomato plants, potentially highlighting beneficial traits that could be harnessed for improved crop resilience or productivity.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyFamily_XII
GenusExiguobacterium
SpeciesExiguobacterium aurantiacum
Strainstrain NCTC13163

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Exiguobacterium aurantiacum strain NCTC13163
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Solanum lycopersicum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Exiguobacterium aurantiacum strain NCTC13163 genome assembly,

Gene Summary

Adenine Count

742359 bp

Thymine Count

739673 bp

Guanine Count

819558 bp

Cytosine Count

824071 bp

Genome Length

3125661 bp

Protein-coding Genes

3180 genes

Non-Coding Genes

96 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l22NCTC13163_00137Not AvailablePositive129300 - 12963212151.9
bs2NCTC13163_00138Not AvailablePositive129646 - 13030524385.3
50s ribosomal protein l16NCTC13163_00139Not AvailablePositive130338 - 13077516418.3
50s ribosomal protein l29NCTC13163_00140Not AvailablePositive130762 - 1309657726.28
bs16NCTC13163_00141Not AvailablePositive130999 - 1312599904.17
50s ribosomal protein l14NCTC13163_00142Not AvailablePositive131303 - 13167113285.3
50s ribosomal protein l24NCTC13163_00143Not AvailablePositive131708 - 13201610945.6
50s ribosomal protein l5NCTC13163_00144Not AvailablePositive132049 - 13258820056.7
alternate 30s ribosomal protein s14NCTC13163_00145Not AvailablePositive132609 - 13287810147.5
30s ribosomal protein s8NCTC13163_00146Not AvailablePositive132910 - 13330814799.2

Displaying genes 131 – 140 of 3276 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

252 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm00022412-demethylmenaquinone-8C50H70O2Chemical structure of 2-demethylmenaquinone-8Not available
Average703.0896Da
Monoisotopic702.5375815Da
BASm0002593(2E)-dodecenoyl-CoAC33H52N7O17P3SChemical structure of (2E)-dodecenoyl-CoA1066-12-2
Average943.789Da
Monoisotopic943.2353235Da

Displaying 1–10 of 252 metabolites

Health Effects

No health effects information available for this bacterium.