Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9119 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1361440 bp
Thymine Count
1360809 bp
Guanine Count
1388860 bp
Cytosine Count
1385128 bp
Genome Length
5496237 bp
Protein-coding Genes
4788 genes
Non-Coding Genes
429 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | Positive | 896128 - 896139 | Not Available |
| Integrase | NCTC9119_00875 | Not Available | Positive | 901738 - 902619 | 32844.9 |
| Integrase | NCTC9119_00876 | Not Available | Negative | 902801 - 903652 | 32208.1 |
| Prophage p4 integrase | NCTC9119_00877 | Not Available | Negative | 903649 - 904068 | 15606.0 |
| Dna restriction methylase | NCTC9119_00878 | Not Available | Negative | 904363 - 905205 | 32556.4 |
| cp4-44 prophage | NCTC9119_00879 | Not Available | Negative | 905290 - 905712 | 15442.2 |
| toxin of the yeev-yeeu toxin-antitoxin system | NCTC9119_00880 | Not Available | Negative | 905675 - 906085 | 15254.3 |
| antitoxin of the yeev-yeeu toxin-antitoxin system | NCTC9119_00881 | Not Available | Negative | 906176 - 906544 | 13705.3 |
| Hypothetical protein | NCTC9119_00882 | Not Available | Negative | 906594 - 906764 | 6290.22 |
| Hypothetical protein | NCTC9119_00883 | Not Available | Negative | 906966 - 907226 | 10088.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Hemorrhagic colitis | Causes | PMC3035056 |
| Early onset neonatal sepsis | Causes | PMC4560869 |
| Renal failure | Causes | PMC4726323 |
| Anemia | Causes | PMC4726323 |
| Hemorrhagic diarrhea | Causes | PMC4726323 |
| Hus | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5995498 |
| Hemolytic uremic syndrome | Causes | PMC5995498 |
| Acute bacterial meningitis | Causes | PMC6306750 |
| Endometritis | Causes | PMC7238638 |





