Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9119 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1361440 bp
Thymine Count
1360809 bp
Guanine Count
1388860 bp
Cytosine Count
1385128 bp
Genome Length
5496237 bp
Protein-coding Genes
4788 genes
Non-Coding Genes
429 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucine transcriptional activator | NCTC9119_04360 | Not Available | Negative | 4484442 - 4485386 | 35715.8 |
| 2-isopropylmalate synthase | NCTC9119_04362 | Not Available | Positive | 4486223 - 4487794 | 57287.1 |
| 3-isopropylmalate dehydrogenase | NCTC9119_04363 | Not Available | Positive | 4487794 - 4488885 | 39503.2 |
| 3-isopropylmalate dehydratase large subunit | NCTC9119_04364 | Not Available | Positive | 4488888 - 4490288 | 49884.7 |
| 3-isopropylmalate dehydratase small subunit | NCTC9119_04365 | Not Available | Positive | 4490299 - 4490904 | 22530.8 |
| putative substrate-binding protein | NCTC9119_04367 | Not Available | Positive | 4491232 - 4492890 | 64320.2 |
| uncharacterised protein | NCTC9119_04368 | Not Available | Negative | 4493046 - 4493153 | 4020.04 |
| putative type iii effector protein | NCTC9119_04369 | Not Available | Negative | 4493119 - 4493688 | 21635.5 |
| thiamine transporter substrate binding subunit | NCTC9119_04371 | Not Available | Positive | 4494060 - 4495043 | 36135.2 |
| thiamine abc transport system, permease protein | NCTC9119_04372 | Not Available | Positive | 4495019 - 4496629 | 59472.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





