Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9434 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277718 bp
Thymine Count
1287500 bp
Guanine Count
1350608 bp
Cytosine Count
1283679 bp
Genome Length
5199505 bp
Protein-coding Genes
4351 genes
Non-Coding Genes
631 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase | NCTC9434_01782 | Not Available | Positive | 1809728 - 1810837 | 39940.4 |
| fimbrial-like adhesin protein | NCTC9434_01783 | Not Available | Positive | 1811100 - 1811381 | 10178.1 |
| fimbrial protein | NCTC9434_01784 | Not Available | Positive | 1811674 - 1812216 | 19017.6 |
| putative periplasmic pilin chaperone | NCTC9434_01785 | Not Available | Positive | 1812297 - 1812971 | 24831.4 |
| fimbrial outer membrane usher protein | NCTC9434_01786 | Not Available | Positive | 1812987 - 1815467 | 92366.3 |
| putative fimbrial adhesin | NCTC9434_01787 | Not Available | Positive | 1815483 - 1816517 | 36927.0 |
| periplasmic modulator of ni and co efflux | NCTC9434_01788 | Not Available | Negative | 1816599 - 1816937 | 12466.8 |
| nickel/cobalt efflux protein rcna | NCTC9434_01789 | Not Available | Negative | 1817156 - 1817980 | 30445.2 |
| transcriptional repressor rcnr | NCTC9434_01790 | Not Available | Positive | 1818101 - 1818373 | 10134.5 |
| uncharacterised protein | NCTC9434_01791 | Not Available | Negative | 1818314 - 1818433 | 4760.73 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





