Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9434 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277718 bp
Thymine Count
1287500 bp
Guanine Count
1350608 bp
Cytosine Count
1283679 bp
Genome Length
5199505 bp
Protein-coding Genes
4351 genes
Non-Coding Genes
631 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyl phosphate 4-deoxy-4-formamido-l-arabinose transferase | NCTC9434_01640 | Not Available | Negative | 1640596 - 1641564 | 36254.3 |
| udp-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferase | NCTC9434_01641 | Not Available | Negative | 1641568 - 1642725 | 42254.0 |
| phosphoglycerate mutase | NCTC9434_01642 | Not Available | Positive | 1643015 - 1643617 | 22394.9 |
| nudix-family hydrolase | NCTC9434_01643 | Not Available | Negative | 1643656 - 1644081 | 16371.6 |
| outer membrane porin protein | NCTC9434_01644 | Not Available | Positive | 1644360 - 1644902 | 18518.6 |
| putative molybdopterin-binding protein | NCTC9434_01645 | Not Available | Positive | 1645002 - 1646204 | 44192.1 |
| transcriptional regulator yfax | NCTC9434_01646 | Not Available | Positive | 1646424 - 1647206 | 29092.2 |
| mandelate racemase/muconate lactonizing protein | NCTC9434_01647 | Not Available | Positive | 1647221 - 1648426 | 44190.9 |
| transport protein yfav | NCTC9434_01648 | Not Available | Positive | 1648483 - 1649772 | 46181.3 |
| putative carbon-carbon lyase | NCTC9434_01649 | Not Available | Positive | 1649790 - 1650593 | 28912.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





