Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9434 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277718 bp
Thymine Count
1287500 bp
Guanine Count
1350608 bp
Cytosine Count
1283679 bp
Genome Length
5199505 bp
Protein-coding Genes
4351 genes
Non-Coding Genes
631 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-serine dehydratase | NCTC9434_01484 | Not Available | Negative | 1502643 - 1503971 | 47880.3 |
| permease dsdx | NCTC9434_01485 | Not Available | Negative | 1503989 - 1505326 | 47154.1 |
| lipoprotein | NCTC9434_01552 | Not Available | Positive | 1548660 - 1549415 | 28039.2 |
| long-chain fatty acid transport protein | NCTC9434_01553 | Not Available | Negative | 1549473 - 1550813 | 48549.1 |
| protein yfcz | NCTC9434_01554 | Not Available | Positive | 1551185 - 1551469 | 10318.2 |
| fatty acid oxidation comple beta subunit (3 -ketoacyl-coa thiolase) | NCTC9434_01555 | Not Available | Positive | 1551650 - 1552960 | 46559.4 |
| fatty acid oxidation complex alpha subunit | NCTC9434_01556 | Not Available | Positive | 1552960 - 1555104 | 77153.0 |
| phosphohistidine phosphatase | NCTC9434_01557 | Not Available | Positive | 1555307 - 1555792 | 17219.8 |
| yfc fimbriae subunit yfcv | NCTC9434_01558 | Not Available | Positive | 1556358 - 1557107 | 26784.1 |
| putative export usher protein | NCTC9434_01559 | Not Available | Positive | 1557284 - 1559629 | 85774.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





