Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9434 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277718 bp
Thymine Count
1287500 bp
Guanine Count
1350608 bp
Cytosine Count
1283679 bp
Genome Length
5199505 bp
Protein-coding Genes
4351 genes
Non-Coding Genes
631 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylaminoimidazole synthetase | NCTC9434_01374 | Not Available | Negative | 1386384 - 1387421 | 36904.3 |
| uracil phosphoribosyltransferase | NCTC9434_01375 | Not Available | Positive | 1387745 - 1388371 | 22534.6 |
| uracil transporter | NCTC9434_01376 | Not Available | Positive | 1388457 - 1389746 | 45095.1 |
| dnaa family protein hda | NCTC9434_01377 | Not Available | Positive | 1389796 - 1390542 | 28371.4 |
| putative glutaredoxin | NCTC9434_01378 | Not Available | Negative | 1390680 - 1391039 | 13459.5 |
| putative peptidase | NCTC9434_01379 | Not Available | Negative | 1391060 - 1392523 | 53907.1 |
| putative permease | NCTC9434_01380 | Not Available | Positive | 1392736 - 1393797 | 39151.8 |
| thioredoxin-dependent thiol peroxidase | NCTC9434_01381 | Not Available | Negative | 1393896 - 1394366 | 17634.9 |
| glycine cleavage system transcriptional repressor | NCTC9434_01382 | Not Available | Negative | 1394366 - 1394938 | 20769.8 |
| dihydrodipicolinate synthase | NCTC9434_01383 | Not Available | Positive | 1395084 - 1395962 | 31285.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





