Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9434 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277718 bp
Thymine Count
1287500 bp
Guanine Count
1350608 bp
Cytosine Count
1283679 bp
Genome Length
5199505 bp
Protein-coding Genes
4351 genes
Non-Coding Genes
631 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase | NCTC9434_01237 | Not Available | Negative | 1245689 - 1246378 | 25682.6 |
| autonomous glycyl radical cofactor | NCTC9434_01238 | Not Available | Positive | 1246683 - 1247066 | 14269.0 |
| putative transporter | NCTC9434_01239 | Not Available | Negative | 1247122 - 1247709 | 21279.5 |
| transcriptional regulator yfie | NCTC9434_01240 | Not Available | Positive | 1247812 - 1248693 | 33324.5 |
| atp-dependent rna helicase | NCTC9434_01241 | Not Available | Negative | 1248726 - 1250060 | 49901.0 |
| trna (adenine-n(6)-)-methyltransferase | NCTC9434_01242 | Not Available | Positive | 1250192 - 1250929 | 27274.4 |
| l-aspartate oxidase | NCTC9434_01243 | Not Available | Negative | 1250914 - 1252536 | 60153.6 |
| rna polymerase sigma factor rpoe | NCTC9434_01244 | Not Available | Positive | 1252944 - 1253519 | 21697.0 |
| sigma-e factor negative regulator | NCTC9434_01245 | Not Available | Positive | 1253552 - 1254202 | 24322.8 |
| sigma-e factor regulatory protein | NCTC9434_01246 | Not Available | Positive | 1254202 - 1255158 | 35737.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





