Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9434 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277718 bp
Thymine Count
1287500 bp
Guanine Count
1350608 bp
Cytosine Count
1283679 bp
Genome Length
5199505 bp
Protein-coding Genes
4351 genes
Non-Coding Genes
631 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase subunit e | NCTC9434_01061 | Not Available | Positive | 1099003 - 1100712 | 64970.1 |
| formate hydrogenlyase subunit 6 | NCTC9434_01062 | Not Available | Positive | 1100722 - 1101264 | 20329.4 |
| formate hydrogenlyase subunit 7 | NCTC9434_01063 | Not Available | Positive | 1101264 - 1102031 | 27999.7 |
| formate hydrogenlyase maturation protein | NCTC9434_01064 | Not Available | Positive | 1102028 - 1102438 | 15451.5 |
| hydrogenase 3 maturation protease | NCTC9434_01065 | Not Available | Positive | 1102431 - 1102901 | 17013.5 |
| hth-type transcriptional regulator ygjm | NCTC9434_01066 | Not Available | Positive | 1103137 - 1103556 | 15417.2 |
| 6-phospho-beta-glucosidase | NCTC9434_01067 | Not Available | Negative | 1103654 - 1105078 | 53847.7 |
| arbutin-, cellobiose-, and salicin-specific pts system eiibc component | NCTC9434_01068 | Not Available | Negative | 1105087 - 1106544 | 50976.0 |
| transcriptional regulator | NCTC9434_01069 | Not Available | Positive | 1106801 - 1107814 | 36889.5 |
| electron transport protein hydn | NCTC9434_01070 | Not Available | Positive | 1107963 - 1108490 | 19027.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





