Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9434 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277718 bp
Thymine Count
1287500 bp
Guanine Count
1350608 bp
Cytosine Count
1283679 bp
Genome Length
5199505 bp
Protein-coding Genes
4351 genes
Non-Coding Genes
631 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| impa family type vi secretion-associated protein | NCTC9434_00958 | Not Available | Negative | 990833 - 993313 | 91729.6 |
| atp-dependent clp proteinase atp-binding chain | NCTC9434_00959 | Not Available | Negative | 993325 - 995970 | 98029.4 |
| hemolysin-coregulated protein hcp | NCTC9434_00960 | Not Available | Negative | 996162 - 996653 | 18579.8 |
| ompa family membrane protein | NCTC9434_00961 | Not Available | Negative | 996711 - 998363 | 60409.3 |
| dotu family type iv/vi secretion system protein | NCTC9434_00962 | Not Available | Negative | 998376 - 999041 | 25311.8 |
| type vi secretion protein | NCTC9434_00963 | Not Available | Negative | 999038 - 1000375 | 49718.8 |
| type vi secretion protein evpb | NCTC9434_00964 | Not Available | Negative | 1000393 - 1001931 | 58021.7 |
| type vi secretion protein | NCTC9434_00965 | Not Available | Negative | 1001990 - 1002490 | 18726.3 |
| Trna-met | Not Available | Not Available | Positive | 1003126 - 1003202 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1003236 - 1003312 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





