Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9434 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277718 bp
Thymine Count
1287500 bp
Guanine Count
1350608 bp
Cytosine Count
1283679 bp
Genome Length
5199505 bp
Protein-coding Genes
4351 genes
Non-Coding Genes
631 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | NCTC9434_00948 | Not Available | Negative | 978234 - 978677 | 16957.4 |
| uncharacterised protein | NCTC9434_00949 | Not Available | Negative | 978934 - 979488 | 21799.5 |
| pyocin large subunit | NCTC9434_00950 | Not Available | Negative | 979563 - 981140 | 58843.0 |
| type vi secretion-associated protein | NCTC9434_00951 | Not Available | Negative | 981146 - 982783 | 61071.5 |
| icmf-like protein | NCTC9434_00952 | Not Available | Negative | 982749 - 986102 | 125355.0 |
| uncharacterised protein | NCTC9434_00953 | Not Available | Negative | 986112 - 987248 | 44179.4 |
| putative type vi secretion protein | NCTC9434_00954 | Not Available | Negative | 987250 - 987510 | 8846.61 |
| uncharacterised protein | NCTC9434_00955 | Not Available | Negative | 987974 - 988267 | 11526.8 |
| uncharacterised protein | NCTC9434_00956 | Not Available | Negative | 988236 - 989069 | 32021.6 |
| pgap1-like protein | NCTC9434_00957 | Not Available | Negative | 989044 - 990813 | 66498.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





