Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9434 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277718 bp
Thymine Count
1287500 bp
Guanine Count
1350608 bp
Cytosine Count
1283679 bp
Genome Length
5199505 bp
Protein-coding Genes
4351 genes
Non-Coding Genes
631 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative adenylate cyclase | NCTC9434_00670 | Not Available | Positive | 676373 - 677674 | 48530.9 |
| bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase | NCTC9434_00671 | Not Available | Positive | 677697 - 680537 | 108324.0 |
| bifunctional protein hlde | NCTC9434_00672 | Not Available | Positive | 680585 - 682018 | 51038.6 |
| inner membrane protein yqik | NCTC9434_00674 | Not Available | Negative | 682437 - 684098 | 60695.1 |
| membrane protein yqij | NCTC9434_00675 | Not Available | Negative | 684125 - 684754 | 23028.3 |
| glycogen synthesis protein glgs | NCTC9434_00676 | Not Available | Positive | 685024 - 685224 | 7922.34 |
| yqic protein | NCTC9434_00677 | Not Available | Negative | 685259 - 685558 | 11439.8 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase | NCTC9434_00679 | Not Available | Positive | 685932 - 686585 | 23340.8 |
| putative fimbrial adhesin | NCTC9434_00680 | Not Available | Negative | 686639 - 687688 | 39311.2 |
| fimbrial chaperone protein | NCTC9434_00681 | Not Available | Negative | 687685 - 688425 | 27389.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





