Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC10429 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1221920 bp
Thymine Count
1221170 bp
Guanine Count
1261024 bp
Cytosine Count
1255603 bp
Genome Length
4959717 bp
Protein-coding Genes
5928 genes
Non-Coding Genes
508 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr family transcriptional regulator | NCTC10429_05299 | Not Available | Positive | 3950877 - 3951608 | 28266.2 |
| is1 transposase | NCTC10429_05300 | Not Available | Negative | 3953298 - 3953486 | 7325.97 |
| isocitrate dehydrogenase | NCTC10429_05301 | Not Available | Negative | 3954133 - 3954300 | 6195.67 |
| isocitrate dehydrogenase | NCTC10429_05302 | Not Available | Negative | 3954330 - 3954683 | 12604.1 |
| isocitrate dehydrogenase | NCTC10429_05303 | Not Available | Negative | 3954958 - 3955383 | 15273.6 |
| ribosomal large subunit pseudouridine synthase e (rrna pseudouridylate synthase e) | NCTC10429_05304 | Not Available | Positive | 3955556 - 3956209 | 24881.8 |
| putative nudix-family hydrolase | NCTC10429_05305 | Not Available | Positive | 3956219 - 3956680 | 17433.8 |
| pp_05086 | NCTC10429_05306 | Not Available | Positive | 3956734 - 3957840 | Not Available |
| putative lysogenization regulator | NCTC10429_05307 | Not Available | Positive | 3957876 - 3958298 | 15286.6 |
| putative lysogenization regulator | NCTC10429_05308 | Not Available | Positive | 3958274 - 3958516 | 8624.77 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





