Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC10429 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1221920 bp
Thymine Count
1221170 bp
Guanine Count
1261024 bp
Cytosine Count
1255603 bp
Genome Length
4959717 bp
Protein-coding Genes
5928 genes
Non-Coding Genes
508 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhse core protein | NCTC10429_04888 | Not Available | Negative | 3643505 - 3645586 | 79514.5 |
| rhse core protein | NCTC10429_04889 | Not Available | Negative | 3645583 - 3647151 | 57882.4 |
| core protein | NCTC10429_04890 | Not Available | Negative | 3647097 - 3647723 | 21809.2 |
| vgrg protein, encoded within repeats that are hotspots for chromosomal duplication formation | NCTC10429_04891 | Not Available | Negative | 3647791 - 3647961 | 6303.44 |
| vgrg protein, encoded within repeats that are hotspots for chromosomal duplication formation | NCTC10429_04892 | Not Available | Negative | 3648114 - 3648500 | 13816.5 |
| impa family type vi secretion-associated protein | NCTC10429_04893 | Not Available | Negative | 3648497 - 3649897 | 53247.6 |
| uncharacterised protein | NCTC10429_04894 | Not Available | Negative | 3650718 - 3650930 | 8259.59 |
| putative glutathione s-transferase | NCTC10429_04895 | Not Available | Negative | 3651006 - 3651623 | 23369.2 |
| l-asparagine permease | NCTC10429_04896 | Not Available | Positive | 3651887 - 3653386 | 54235.3 |
| putative receptor | NCTC10429_04897 | Not Available | Negative | 3653502 - 3654563 | 38658.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





