Escherichia coli strain NCTC10429

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain NCTC10429 is a Gram-negative, rod-shaped bacterium characterized as a facultative anaerobe, allowing it to thrive in varying oxygen conditions. This strain exhibits mobility through the presence of flagella and typically arranges itself in singles and pairs. It is mesophilic, with an optimal growth temperature of 37°C. NCTC10429 is associated with a variety of hosts, including Homo sapiens, Gallus gallus, Bos taurus, and several other animals and plants, indicating a broad ecological niche. The strain possesses a single replicon and is structurally composed of two membranes. It is recognized for its free-living biotic relationships, which further facilitates its interaction with multiple hosts. Clinically, E. coli NCTC10429 is linked to numerous health issues in humans, such as urinary tract infections (UTIs), gastrointestinal infections, and neonatal meningitis, among others. It is notorious for causing severe conditions like hemolytic uremic syndrome (HUS) and septicemia, highlighting its pathogenic potential. The strain's ability to infect a wide range of hosts, coupled with its diverse pathogenic effects, underscores its ecological adaptability and significance in both environmental and clinical microbiology. Understanding the traits of E. coli NCTC10429 can aid in developing effective prevention and treatment strategies for the various diseases it causes, emphasizing the need for ongoing research in microbial pathogenesis.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain NCTC10429

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain NCTC10429
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain NCTC10429 genome assembly, contig:

Gene Summary

Adenine Count

1221920 bp

Thymine Count

1221170 bp

Guanine Count

1261024 bp

Cytosine Count

1255603 bp

Genome Length

4959717 bp

Protein-coding Genes

5928 genes

Non-Coding Genes

508 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive1465580 - 1465591Not Available
Deoxycytidylate deaminaseNCTC10429_01929Not AvailablePositive1477230 - 147789524822.7
Site-specific integraseNCTC10429_01930Not AvailableNegative1478277 - 147904728554.7
IntegraseNCTC10429_01931Not AvailableNegative1479133 - 14792946078.39
Repressor protein ciNCTC10429_01932Not AvailableNegative1479296 - 147992822727.3
Rha family transcriptional regulatorNCTC10429_01933Not AvailablePositive1480048 - 14802909242.27
Regulatory cii family proteinNCTC10429_01934Not AvailablePositive1480323 - 148083519333.4
Tail proteinNCTC10429_01935Not AvailablePositive1480796 - 148163231351.2
uncharacterised proteinNCTC10429_01936Not AvailableNegative1481476 - 148190715827.8
Hypothetical proteinNCTC10429_01937Not AvailableNegative1481946 - 148242818035.5

Displaying genes 31 – 40 of 6436 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total