Escherichia coli strain NCTC8179

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain NCTC8179 is a Gram-negative, rod-shaped bacterium exhibiting mobility, facilitated by the presence of flagella. It is classified as a facultative anaerobe, allowing it to thrive in various oxygen conditions. This strain is mesophilic, with an optimal growth temperature of 37°C. NCTC8179 is notable for its wide range of hosts, which includes various species such as Homo sapiens, Gallus gallus, Bos taurus, and several others across different taxa, including mammals, birds, and even plants like Solanum lycopersicum. This diversity in hosts reflects its adaptability and ecological versatility. The strain possesses a single replicon and is characterized by two membranes, typical of its classification within the Enterobacteriaceae family. Clinically, E. coli NCTC8179 is associated with numerous health effects, particularly in humans. It is implicated in conditions such as urinary tract infections (UTIs), gastrointestinal infections, neonatal meningitis, and various forms of colitis. The pathogenicity of this strain highlights its role as a significant contributor to foodborne illnesses and other health complications, such as hemolytic uremic syndrome (HUS) and septicemia. The free-living nature of NCTC8179, combined with its pathogenic potential, underscores its relevance in both ecological and clinical contexts. Its ability to cause serious health issues, particularly in vulnerable populations, emphasizes the importance of monitoring its prevalence and understanding its interactions within diverse environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain NCTC8179

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain NCTC8179
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain NCTC8179 genome assembly, contig:

Gene Summary

Adenine Count

1415105 bp

Thymine Count

1416640 bp

Guanine Count

1468752 bp

Cytosine Count

1440013 bp

Genome Length

5740510 bp

Protein-coding Genes

6026 genes

Non-Coding Genes

1220 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive23 - 34Not Available
Major capsid protein, p2 familyNCTC8179_00001Not AvailablePositive47 - 34911256.8
Major capsid protein, p2 familyNCTC8179_00002Not AvailablePositive490 - 92115796.6
Major capsid protein, p2 familyNCTC8179_00003Not AvailablePositive915 - 10976978.35
Terminase endonuclease subunitNCTC8179_00004Not AvailablePositive1143 - 13557865.56
Small terminase subunitNCTC8179_00005Not AvailablePositive1330 - 195022806.6
Trna-asn;Not AvailableNot AvailablePositive1301 - 1376Not Available
Head completion/stabilization proteinNCTC8179_00006Not AvailablePositive2106 - 248314066.7
Trna-ser;Not AvailableNot AvailablePositive2369 - 2458Not Available
Tail protein xNCTC8179_00007Not AvailablePositive2539 - 27397465.94

Displaying genes 1 – 10 of 7246 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total