Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | NCTC9117_06265 | Not Available | Positive | 5068094 - 5068786 | 26077.5 |
| major facilitator superfamily protein | NCTC9117_06266 | Not Available | Positive | 5068809 - 5070182 | 49409.7 |
| ribose operon repressor | NCTC9117_06267 | Not Available | Negative | 5070201 - 5071193 | 36614.1 |
| ribokinase | NCTC9117_06268 | Not Available | Negative | 5071197 - 5072126 | 32292.4 |
| d-ribose transporter subunit rbsb | NCTC9117_06269 | Not Available | Negative | 5072252 - 5073142 | 30940.2 |
| high-affinity ribose transport system permease protein rbsc | NCTC9117_06270 | Not Available | Negative | 5073167 - 5074132 | 33454.0 |
| high affinity ribose transport atp-binding protein rbsa | NCTC9117_06271 | Not Available | Negative | 5074137 - 5075642 | 55045.0 |
| d-ribose high-affinity transporter | NCTC9117_06272 | Not Available | Negative | 5075650 - 5076105 | 16696.2 |
| kup system potassium uptake protein | NCTC9117_06273 | Not Available | Negative | 5076236 - 5078104 | 69298.3 |
| regulatory atpase rava | NCTC9117_06274 | Not Available | Positive | 5078327 - 5079823 | 56392.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




