Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein papj | NCTC9117_05671 | Not Available | Negative | 4580255 - 4580836 | 20751.9 |
| chaperone protein papd | NCTC9117_05672 | Not Available | Negative | 4580873 - 4581592 | 26804.3 |
| papc protein | NCTC9117_05673 | Not Available | Negative | 4581678 - 4583354 | 60556.8 |
| papc protein | NCTC9117_05674 | Not Available | Negative | 4583435 - 4584235 | 28969.6 |
| protein paph | NCTC9117_05675 | Not Available | Negative | 4584245 - 4584745 | 18599.0 |
| major pilin protein papa | NCTC9117_05676 | Not Available | Negative | 4584895 - 4585443 | 18569.8 |
| major pilu subunit operon regulatory protein papb | NCTC9117_05677 | Not Available | Negative | 4585649 - 4585963 | 11781.2 |
| papi protein | NCTC9117_05678 | Not Available | Positive | 4586380 - 4586601 | 8312.99 |
| transposase (partial) | NCTC9117_05679 | Not Available | Negative | 4587087 - 4587272 | 7198.45 |
| putative transposase | NCTC9117_05680 | Not Available | Negative | 4587391 - 4588437 | 38990.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




