Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate/aspartate periplasmic binding protein | NCTC9117_04403 | Not Available | Positive | 3552134 - 3552361 | 8312.39 |
| glutamate/aspartate transport system permease | NCTC9117_04405 | Not Available | Positive | 3552986 - 3553726 | 27504.3 |
| glutamate/aspartate abc transporter, permease protein | NCTC9117_04406 | Not Available | Positive | 3553726 - 3554400 | 24889.2 |
| glutamate/aspartate abc transporter atp-binding protein | NCTC9117_04407 | Not Available | Positive | 3554400 - 3555125 | 26662.7 |
| pyrimidine-specific ribonucleoside hydrolase (cytidine/uridine-specific hydrolase) | NCTC9117_04408 | Not Available | Positive | 3555243 - 3556178 | 33794.8 |
| putative truncated dnak protein | NCTC9117_04409 | Not Available | Positive | 3556262 - 3556939 | 24607.2 |
| chaperone protein | NCTC9117_04410 | Not Available | Positive | 3556971 - 3557933 | 36350.4 |
| hsc56 co-chaperone of hscc | NCTC9117_04411 | Not Available | Negative | 3557993 - 3559444 | 55685.0 |
| putative trna ligase | NCTC9117_04412 | Not Available | Negative | 3559441 - 3560148 | 27023.8 |
| outer membrane protein | NCTC9117_04413 | Not Available | Positive | 3560264 - 3560803 | 20271.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




