Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Probable excisionase hkac | NCTC9117_05418 | Not Available | Negative | 4387076 - 4387282 | 7819.55 |
| Isrso10-transposase orfa protein | NCTC9117_05419 | Not Available | Positive | 4387850 - 4388215 | 13452.4 |
| Is2 transposase tnpb | NCTC9117_05420 | Not Available | Positive | 4388173 - 4389078 | 34400.0 |
| uncharacterised protein | NCTC9117_05421 | Not Available | Negative | 4389742 - 4389942 | 7414.29 |
| protein of uncharacterised function (duf3296) | NCTC9117_05422 | Not Available | Positive | 4390142 - 4390306 | 6380.8 |
| cp4-6 prophage protein | NCTC9117_05423 | Not Available | Positive | 4390357 - 4390710 | 13357.9 |
| ybl85 | NCTC9117_05424 | Not Available | Positive | 4390970 - 4391371 | 15549.2 |
| dna-directed rna polymerase, beta subunit/140 kd subunit | NCTC9117_05425 | Not Available | Positive | 4391359 - 4391793 | 16525.8 |
| Truncated transposase | NCTC9117_05426 | Not Available | Positive | 4392148 - 4392528 | 14056.0 |
| Transposase | NCTC9117_05427 | Not Available | Positive | 4392525 - 4392872 | 12771.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




