Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine transport atp-binding protein glnq | NCTC9117_04212 | Not Available | Positive | 3396988 - 3397242 | 9530.62 |
| membrane protein ybio | NCTC9117_04213 | Not Available | Positive | 3397503 - 3397736 | 8819.91 |
| membrane protein ybio | NCTC9117_04214 | Not Available | Positive | 3397782 - 3398027 | 8753.51 |
| membrane protein ybio | NCTC9117_04215 | Not Available | Positive | 3397996 - 3399726 | 63646.4 |
| sam-dependent methyltransferase | NCTC9117_04216 | Not Available | Negative | 3399723 - 3400655 | 34553.3 |
| colanic acid mucoidy stimulation protein | NCTC9117_04217 | Not Available | Positive | 3400755 - 3400967 | 8235.37 |
| protein involved in colanic acid production | NCTC9117_04218 | Not Available | Positive | 3400934 - 3401188 | 8648.07 |
| catecholate siderophore tonb-dependent receptor | NCTC9117_04219 | Not Available | Positive | 3401298 - 3402305 | 35963.8 |
| catecholate siderophore tonb-dependent receptor | NCTC9117_04220 | Not Available | Positive | 3402263 - 3402748 | 17598.1 |
| tonb-dependent receptor fiu | NCTC9117_04221 | Not Available | Positive | 3402770 - 3403342 | 21166.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




