Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein | NCTC9117_04192 | Not Available | Positive | 3383942 - 3385075 | 42513.4 |
| putative abc transporter atp-binding protein | NCTC9117_04193 | Not Available | Negative | 3385446 - 3387038 | 59861.4 |
| l,d-transpeptidase | NCTC9117_04194 | Not Available | Positive | 3387257 - 3388177 | 33327.2 |
| transporter | NCTC9117_04195 | Not Available | Negative | 3388236 - 3388670 | 15780.0 |
| transporter | NCTC9117_04196 | Not Available | Negative | 3389067 - 3389204 | 5185.67 |
| transcriptional regulator (manganese transport regulator) | NCTC9117_04197 | Not Available | Negative | 3389164 - 3389757 | 21990.1 |
| mn(2)-response protein, mntr-repressed | NCTC9117_04198 | Not Available | Positive | 3390011 - 3390184 | 6623.41 |
| membrane protein ybip | NCTC9117_04199 | Not Available | Positive | 3390838 - 3391791 | 35590.3 |
| membrane protein ybip | NCTC9117_04200 | Not Available | Positive | 3391755 - 3391985 | 8760.52 |
| outer membrane protein x | NCTC9117_04201 | Not Available | Negative | 3392069 - 3392548 | 17107.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




