Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldose sugar dehydrogenase | NCTC9117_04162 | Not Available | Negative | 3363166 - 3363405 | 8993.69 |
| aldose sugar dehydrogenase | NCTC9117_04163 | Not Available | Negative | 3363392 - 3364282 | 32730.1 |
| biofilm formation regulatory protein bssr | NCTC9117_04164 | Not Available | Negative | 3364393 - 3364776 | 14536.6 |
| radical sam superfamily protein | NCTC9117_04165 | Not Available | Positive | 3364989 - 3366314 | 49584.6 |
| putative signaling protein | NCTC9117_04166 | Not Available | Negative | 3366483 - 3366647 | 6009.47 |
| putative signaling protein | NCTC9117_04167 | Not Available | Negative | 3366655 - 3366921 | 9954.97 |
| putative signaling protein | NCTC9117_04168 | Not Available | Negative | 3366967 - 3367689 | 27463.4 |
| cyclic di-gmp phosphodiesterase | NCTC9117_04169 | Not Available | Negative | 3367697 - 3367879 | 6872.42 |
| cyclic di-gmp phosphodiesterase | NCTC9117_04170 | Not Available | Negative | 3368032 - 3368430 | 15164.4 |
| cyclic di-gmp phosphodiesterase | NCTC9117_04171 | Not Available | Negative | 3368387 - 3368896 | 19512.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




