Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s6 modification protein | NCTC9117_04141 | Not Available | Negative | 3350153 - 3351055 | 32438.5 |
| nitroreductase nfsa | NCTC9117_04142 | Not Available | Negative | 3351116 - 3351838 | 26802.2 |
| inner membrane protein | NCTC9117_04143 | Not Available | Negative | 3351822 - 3352109 | 10521.4 |
| glutaredoxin | NCTC9117_04144 | Not Available | Positive | 3352269 - 3352526 | 9685.35 |
| inner membrane protein ybjm | NCTC9117_04145 | Not Available | Negative | 3352556 - 3352933 | 14159.7 |
| putative transport protein with two rck domains | NCTC9117_04146 | Not Available | Positive | 3353203 - 3353481 | 9936.62 |
| putative permease | NCTC9117_04147 | Not Available | Positive | 3353481 - 3353696 | 7186.08 |
| putative permease | NCTC9117_04148 | Not Available | Positive | 3353714 - 3354487 | 28974.3 |
| putative permease | NCTC9117_04149 | Not Available | Positive | 3354477 - 3354887 | 14010.8 |
| deor-type transcriptional regulator | NCTC9117_04151 | Not Available | Negative | 3355062 - 3355598 | 20357.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




