Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit | NCTC9117_04101 | Not Available | Negative | 3319192 - 3319755 | 21069.6 |
| atp-dependent clp protease adaptor protein | NCTC9117_04102 | Not Available | Negative | 3319786 - 3320106 | 12179.7 |
| stationary phase/starvation inducible regulatory protein cspd | NCTC9117_04103 | Not Available | Positive | 3320429 - 3320653 | 7969.41 |
| macrolide export atp-binding/permease protein | NCTC9117_04104 | Not Available | Negative | 3320726 - 3320998 | 9511.95 |
| macrolide export atp-binding/permease protein | NCTC9117_04105 | Not Available | Negative | 3320989 - 3321894 | 33183.4 |
| macrolide export atp-binding/permease protein | NCTC9117_04106 | Not Available | Negative | 3321978 - 3322670 | 25260.3 |
| macrolide-specific efflux protein | NCTC9117_04107 | Not Available | Negative | 3322667 - 3323782 | 40656.4 |
| virulence protein | NCTC9117_04108 | Not Available | Positive | 3323897 - 3324214 | 12340.3 |
| virg localization protein virk | NCTC9117_04109 | Not Available | Positive | 3324270 - 3324623 | 13147.0 |
| nucleoside triphosphate hydrolase domain | NCTC9117_04110 | Not Available | Negative | 3324886 - 3325332 | 16814.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




