Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxide and acid resistance protein, upf0434 family | NCTC9117_04049 | Not Available | Negative | 3272181 - 3272363 | 6855.35 |
| putative cytoplasmic protein | NCTC9117_04050 | Not Available | Negative | 3272415 - 3273404 | 38625.5 |
| putative cytoplasmic protein | NCTC9117_04051 | Not Available | Negative | 3273408 - 3273647 | 8808.76 |
| tetraacyldisaccharide 4'-kinase (lipid a 4'-kinase) | NCTC9117_04052 | Not Available | Negative | 3273684 - 3274670 | 35591.4 |
| lipid a export permease msba | NCTC9117_04053 | Not Available | Negative | 3274667 - 3276415 | 64464.6 |
| putative competence-related protein | NCTC9117_04054 | Not Available | Negative | 3276452 - 3278716 | 84478.8 |
| integration host factor | NCTC9117_04055 | Not Available | Negative | 3278923 - 3279207 | 10651.8 |
| 30s ribosomal protein s1 | NCTC9117_04056 | Not Available | Negative | 3279367 - 3280620 | 46066.6 |
| 30s ribosomal protein s1 | NCTC9117_04057 | Not Available | Negative | 3280668 - 3281039 | 13324.2 |
| cytidylate kinase | NCTC9117_04058 | Not Available | Negative | 3281032 - 3281832 | 29389.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




