Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exported protein ycbk | NCTC9117_04039 | Not Available | Negative | 3259414 - 3259962 | 20355.6 |
| putative peptidoglycan binding domain-containing protein | NCTC9117_04040 | Not Available | Negative | 3260143 - 3261990 | 67844.3 |
| chromosome partition protein | NCTC9117_04041 | Not Available | Negative | 3262251 - 3264662 | 92461.2 |
| chromosome partition protein | NCTC9117_04042 | Not Available | Negative | 3264722 - 3266710 | 75574.2 |
| condesin subunit e | NCTC9117_04043 | Not Available | Negative | 3266710 - 3267414 | 26976.1 |
| chromosome partition protein | NCTC9117_04044 | Not Available | Negative | 3267395 - 3268717 | 50581.7 |
| metallothionein smta | NCTC9117_04045 | Not Available | Negative | 3268714 - 3269499 | 29816.0 |
| inner membrane protein | NCTC9117_04046 | Not Available | Positive | 3269635 - 3270414 | 28668.0 |
| uncharacterised protein | NCTC9117_04047 | Not Available | Negative | 3270391 - 3271284 | 34489.6 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | NCTC9117_04048 | Not Available | Negative | 3271438 - 3272184 | 27616.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




