Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase-1 operon protein | NCTC9117_03979 | Not Available | Negative | 3206570 - 3206701 | 4904.75 |
| hydrogenase 1 maturation protease | NCTC9117_03980 | Not Available | Negative | 3206698 - 3207285 | 21547.7 |
| ni/fe-hydrogenase 1 b-type cytochrome subunit | NCTC9117_03981 | Not Available | Negative | 3207282 - 3207989 | 27598.8 |
| hydrogenase-1 large subunit | NCTC9117_03982 | Not Available | Negative | 3208008 - 3208904 | 33189.4 |
| hydrogenase-1 large subunit | NCTC9117_03983 | Not Available | Negative | 3208985 - 3209416 | 15768.8 |
| hydrogenase-1 large subunit | NCTC9117_03984 | Not Available | Negative | 3209395 - 3209799 | 14776.8 |
| hydrogenase 1, small subunit | NCTC9117_03985 | Not Available | Negative | 3209796 - 3210017 | 7610.85 |
| hydrogenase 1, small subunit | NCTC9117_03986 | Not Available | Negative | 3210284 - 3210640 | 12835.0 |
| Trna-undet | Not Available | Not Available | Positive | 3211349 - 3211435 | Not Available |
| putative carrier/transport protein | NCTC9117_03988 | Not Available | Positive | 3211641 - 3211805 | 5913.99 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




