Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 3144078 - 3144165 | Not Available |
| ybl54 | NCTC9117_03909 | Not Available | Negative | 3144169 - 3144813 | 23191.3 |
| inner membrane protein | NCTC9117_03910 | Not Available | Negative | 3144901 - 3145317 | 16805.1 |
| inner membrane protein | NCTC9117_03911 | Not Available | Negative | 3145745 - 3145882 | 5398.96 |
| transposase | NCTC9117_03912 | Not Available | Positive | 3146284 - 3146583 | 11543.8 |
| is3 element transposase | NCTC9117_03913 | Not Available | Positive | 3146580 - 3147446 | 33542.2 |
| putative diguanylate cyclase | NCTC9117_03914 | Not Available | Negative | 3147487 - 3147825 | 12411.8 |
| putative diguanylate cyclase | NCTC9117_03915 | Not Available | Negative | 3147951 - 3148172 | 8647.83 |
| putative diguanylate cyclase | NCTC9117_03916 | Not Available | Negative | 3148400 - 3148846 | 17275.7 |
| outer membrane protein pgaa | NCTC9117_03917 | Not Available | Positive | 3149433 - 3150929 | 56209.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




