Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase t | NCTC9117_03796 | Not Available | Negative | 3054694 - 3055920 | 44926.1 |
| spermidine/putrescine abc transporter atp-binding protein | NCTC9117_03797 | Not Available | Positive | 3056170 - 3057306 | 43030.8 |
| spermidine/putrescine abc transporter membrane protein | NCTC9117_03798 | Not Available | Positive | 3057290 - 3058123 | 31246.1 |
| spermidine/putrescine abc transporter permease | NCTC9117_03799 | Not Available | Positive | 3058220 - 3059005 | 28670.8 |
| spermidine/putrescine abc transporter substrate-binding protein | NCTC9117_03800 | Not Available | Positive | 3058983 - 3059978 | 37063.7 |
| membrane protein ymfa | NCTC9117_03801 | Not Available | Positive | 3060035 - 3060496 | 17416.9 |
| inner membrane protein | NCTC9117_03802 | Not Available | Positive | 3060675 - 3061280 | 22197.0 |
| nad-dependent deacetylase | NCTC9117_03803 | Not Available | Negative | 3061400 - 3062239 | 31465.9 |
| n-acetyl-d-glucosamine kinase | NCTC9117_03804 | Not Available | Negative | 3062255 - 3063082 | 29857.8 |
| lipoprotein-releasing system transmembrane protein | NCTC9117_03805 | Not Available | Negative | 3063046 - 3064431 | 50471.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




