Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein involved in biofilm formation | NCTC9117_03776 | Not Available | Negative | 3039976 - 3040224 | 9701.79 |
| regulator of acid resistance, influenced by indole | NCTC9117_03777 | Not Available | Negative | 3040337 - 3040603 | 9694.59 |
| protein | NCTC9117_03778 | Not Available | Negative | 3040947 - 3041183 | 8769.5 |
| putative signal transduction protein | NCTC9117_03779 | Not Available | Positive | 3041497 - 3042708 | 45297.6 |
| merr family transcriptional regulator | NCTC9117_03780 | Not Available | Positive | 3042913 - 3043644 | 28266.2 |
| protein | NCTC9117_03781 | Not Available | Positive | 3043865 - 3044269 | 15770.0 |
| isocitrate dehydrogenase | NCTC9117_03782 | Not Available | Negative | 3045395 - 3046645 | 45787.4 |
| ribosomal large subunit pseudouridine synthase e (rrna pseudouridylate synthase e) | NCTC9117_03783 | Not Available | Positive | 3046817 - 3047470 | 24881.8 |
| putative nudix-family hydrolase | NCTC9117_03784 | Not Available | Positive | 3047480 - 3047899 | 15809.5 |
| pp_03626 | NCTC9117_03785 | Not Available | Positive | 3048296 - 3048826 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




