Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts-dependent dihydroxyacetone kinase operon regulator (sigma-54 dependent transcriptional regulator) | NCTC9117_03735 | Not Available | Negative | 3003993 - 3005912 | 70565.9 |
| pts-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit | NCTC9117_03736 | Not Available | Positive | 3006140 - 3007210 | 38217.4 |
| dihydroxyacetone kinase subunit dhal | NCTC9117_03737 | Not Available | Positive | 3007221 - 3007853 | 22633.1 |
| dihydroxyacetone kinase subunit m | NCTC9117_03738 | Not Available | Positive | 3007864 - 3008349 | 17291.3 |
| dihydroxyacetone kinase subunit m | NCTC9117_03739 | Not Available | Positive | 3008340 - 3009281 | 35007.8 |
| periplasmic trehalase | NCTC9117_03740 | Not Available | Positive | 3009601 - 3011298 | 63640.0 |
| protein | NCTC9117_03741 | Not Available | Negative | 3011378 - 3011818 | 16695.8 |
| transglycosylase associated protein | NCTC9117_03742 | Not Available | Negative | 3011996 - 3012250 | 8775.33 |
| protein involved in flagellar function | NCTC9117_03743 | Not Available | Positive | 3012451 - 3013185 | 27858.8 |
| membrane-bound lytic murein transglycosylase e | NCTC9117_03744 | Not Available | Negative | 3013187 - 3013798 | 22227.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




