Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan synthase | NCTC9117_03571 | Not Available | Positive | 2888924 - 2890117 | 42985.6 |
| tryptophan synthase alpha chain | NCTC9117_03572 | Not Available | Positive | 2890117 - 2890923 | 28725.8 |
| protein | NCTC9117_03573 | Not Available | Positive | 2891305 - 2891511 | 7261.68 |
| ycif protein | NCTC9117_03574 | Not Available | Positive | 2891568 - 2892068 | 18598.2 |
| protein ycie | NCTC9117_03575 | Not Available | Positive | 2892114 - 2892620 | 18962.5 |
| rha family phage regulatory protein | NCTC9117_03578 | Not Available | Positive | 2893262 - 2893816 | 20976.0 |
| tail component | NCTC9117_03579 | Not Available | Negative | 2893943 - 2894113 | 6228.47 |
| methylase | NCTC9117_03581 | Not Available | Positive | 2894866 - 2895219 | 13184.1 |
| outer membrane protein w | NCTC9117_03656 | Not Available | Negative | 2943511 - 2944164 | 23528.8 |
| membrane protein ycic | NCTC9117_03657 | Not Available | Positive | 2944521 - 2945264 | 26420.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




