Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane-associated peptidase | NCTC9117_03303 | Not Available | Positive | 2652201 - 2652308 | 3643.16 |
| membrane-associated peptidase | NCTC9117_03304 | Not Available | Positive | 2652347 - 2653927 | 58125.9 |
| glutamate decarboxylase beta | NCTC9117_03305 | Not Available | Positive | 2654287 - 2655687 | 52671.0 |
| glutamate/gamma-aminobutyrate antiporter (extreme acid sensitivity protein) | NCTC9117_03306 | Not Available | Positive | 2656031 - 2657377 | 48355.5 |
| putative lipoprotein | NCTC9117_03307 | Not Available | Positive | 2657508 - 2658827 | 49576.9 |
| putative signal transduction protein | NCTC9117_03308 | Not Available | Positive | 2659191 - 2660573 | 53180.7 |
| heme-regulated cyclic amp phosphodiesterase (direct oxygen sensor protein) | NCTC9117_03309 | Not Available | Positive | 2660598 - 2662463 | 70095.1 |
| heme-regulated cyclic amp phosphodiesterase (direct oxygen sensor protein) | NCTC9117_03310 | Not Available | Positive | 2662402 - 2662992 | 22133.0 |
| d-alanyl-d-alanine dipeptidase | NCTC9117_03311 | Not Available | Positive | 2663250 - 2663831 | 21214.2 |
| abc transporter substrate-binding protein | NCTC9117_03312 | Not Available | Positive | 2663845 - 2665395 | 57644.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




