Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein associated with alginate biosynthesis | NCTC9117_03116 | Not Available | Positive | 2500059 - 2500394 | 12323.8 |
| putative short chain dehydrogenase | NCTC9117_03117 | Not Available | Negative | 2500391 - 2501113 | 26393.9 |
| arginine/ornithine antiporter | NCTC9117_03118 | Not Available | Negative | 2501150 - 2502532 | 49504.5 |
| protein ydgh | NCTC9117_03119 | Not Available | Negative | 2502718 - 2503662 | 33874.9 |
| nad(p) transhydrogenase subunit alpha | NCTC9117_03120 | Not Available | Positive | 2504186 - 2505745 | 55482.6 |
| nad(p) transhydrogenase subunit beta | NCTC9117_03121 | Not Available | Positive | 2505730 - 2507118 | 48726.0 |
| transporter | NCTC9117_03122 | Not Available | Negative | 2507143 - 2508177 | 37544.3 |
| multidrug resistance protein | NCTC9117_03123 | Not Available | Positive | 2508589 - 2508954 | 13115.7 |
| multidrug resistance protein | NCTC9117_03124 | Not Available | Positive | 2508941 - 2509270 | 11720.8 |
| putative protease | NCTC9117_03125 | Not Available | Negative | 2509309 - 2509683 | 13431.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




