Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transmembrane anchor protein | NCTC9117_02950 | Not Available | Negative | 2375967 - 2376074 | 4115.44 |
| non-lee-encoded type iii secreted effector | NCTC9117_02951 | Not Available | Negative | 2376245 - 2376637 | 14419.5 |
| non-lee-encoded type iii secreted effector | NCTC9117_02952 | Not Available | Negative | 2376589 - 2377407 | 30739.8 |
| threonine trna synthetase | NCTC9117_02953 | Not Available | Positive | 2378720 - 2378953 | 8519.29 |
| threonine trna synthetase | NCTC9117_02954 | Not Available | Positive | 2379201 - 2379869 | 25512.2 |
| threonine trna synthetase | NCTC9117_02955 | Not Available | Positive | 2379957 - 2380589 | 24009.8 |
| translation initiation factor if-3 | NCTC9117_02956 | Not Available | Positive | 2380701 - 2381135 | 16638.4 |
| 50s ribosomal subunit protein l35 | NCTC9117_02957 | Not Available | Positive | 2381232 - 2381429 | 7289.38 |
| 50s ribosomal protein l20 | NCTC9117_02958 | Not Available | Positive | 2381482 - 2381838 | 13497.7 |
| phenylalanyl-trna synthetase subunit alpha | NCTC9117_02960 | Not Available | Positive | 2382289 - 2383272 | 36833.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




