Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative signal transduction protein | NCTC9117_02808 | Not Available | Positive | 2265055 - 2265606 | 20274.3 |
| prop effector protein | NCTC9117_02809 | Not Available | Positive | 2265703 - 2266401 | 25863.9 |
| tail-specific protease | NCTC9117_02810 | Not Available | Positive | 2266421 - 2266861 | 17200.5 |
| tail-specific protease | NCTC9117_02811 | Not Available | Positive | 2266905 - 2268470 | 57911.2 |
| m48b family peptidase | NCTC9117_02812 | Not Available | Positive | 2268662 - 2269327 | 23657.8 |
| m48b family peptidase | NCTC9117_02813 | Not Available | Positive | 2269305 - 2269544 | 9075.06 |
| transporter | NCTC9117_02814 | Not Available | Negative | 2269590 - 2270111 | 17927.5 |
| transporter | NCTC9117_02815 | Not Available | Negative | 2270059 - 2270964 | 31922.0 |
| iclr-family transcriptional regulator | NCTC9117_02816 | Not Available | Positive | 2271141 - 2271932 | 30031.1 |
| protein | NCTC9117_02817 | Not Available | Negative | 2272075 - 2272314 | 8514.67 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




