Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor for flagellar operon | NCTC9117_02695 | Not Available | Positive | 2180222 - 2180941 | 27522.8 |
| fliz protein | NCTC9117_02696 | Not Available | Positive | 2180987 - 2181538 | 21482.8 |
| cystine transporter subunit | NCTC9117_02697 | Not Available | Positive | 2181569 - 2182426 | 31070.2 |
| d-cysteine desulfhydrase | NCTC9117_02698 | Not Available | Positive | 2182531 - 2183517 | 35197.5 |
| putative amino acid transport protein abc superfamily | NCTC9117_02699 | Not Available | Positive | 2183532 - 2184200 | 24802.7 |
| putative cystine abc-transporter, atp-binding protein | NCTC9117_02700 | Not Available | Positive | 2184197 - 2184949 | 27677.7 |
| dna-binding transcriptional activator sdia | NCTC9117_02701 | Not Available | Positive | 2185179 - 2185901 | 28033.8 |
| conserved protein, duf2594 family | NCTC9117_02702 | Not Available | Negative | 2185968 - 2186192 | 8239.04 |
| response regulator uvry | NCTC9117_02703 | Not Available | Positive | 2186651 - 2187307 | 23894.1 |
| uvrabc system protein c | NCTC9117_02704 | Not Available | Positive | 2187304 - 2189136 | 68192.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




