Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | NCTC9117_02603 | Not Available | Positive | 2109018 - 2109317 | 11543.8 |
| is3 element transposase | NCTC9117_02604 | Not Available | Positive | 2109314 - 2110045 | 28059.7 |
| bifunctional adenosylcobalamin biosynthesis protein | NCTC9117_02605 | Not Available | Positive | 2111628 - 2112170 | 20034.0 |
| cobalamin synthase | NCTC9117_02606 | Not Available | Positive | 2112167 - 2112910 | 26387.3 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | NCTC9117_02607 | Not Available | Positive | 2112922 - 2114001 | 37058.4 |
| erfk/ybis/ycfs/ynhg family protein | NCTC9117_02608 | Not Available | Positive | 2114063 - 2114998 | 34494.4 |
| Trna-asn | Not Available | Not Available | Positive | 2115055 - 2115130 | Not Available |
| nitrogen assimilation regulatory protein nac | NCTC9117_02610 | Not Available | Positive | 2115457 - 2116374 | 32825.0 |
| lysr family transcriptional regulator | NCTC9117_02611 | Not Available | Positive | 2116476 - 2117426 | 35899.1 |
| Trna-asn | Not Available | Not Available | Positive | 2117464 - 2117539 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




