Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative gtp-binding protein | NCTC9117_02593 | Not Available | Negative | 2097634 - 2098506 | 32480.8 |
| cp4-57 prophage protein | NCTC9117_02594 | Not Available | Positive | 2099735 - 2101219 | 55746.4 |
| uncharacterised protein | NCTC9117_02595 | Not Available | Negative | 2101542 - 2102144 | 23616.4 |
| putative phage-related regulatory protein | NCTC9117_02596 | Not Available | Negative | 2102231 - 2102437 | 7861.64 |
| uncharacterised protein | NCTC9117_02597 | Not Available | Negative | 2103760 - 2103960 | 7444.3 |
| malate transporter | NCTC9117_02598 | Not Available | Positive | 2104159 - 2104728 | 21842.2 |
| ybl85 | NCTC9117_02599 | Not Available | Positive | 2104988 - 2105389 | 15549.2 |
| dna-directed rna polymerase, beta subunit/140 kd subunit | NCTC9117_02600 | Not Available | Positive | 2105377 - 2105895 | 19269.1 |
| transposase | NCTC9117_02601 | Not Available | Positive | 2106070 - 2107449 | 52816.4 |
| phosphotriesterase | NCTC9117_02602 | Not Available | Negative | 2108101 - 2108931 | 30061.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




