Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp phosphoribosyltransferase | NCTC9117_02563 | Not Available | Negative | 2074387 - 2075271 | 32456.3 |
| antitoxin yefm | NCTC9117_02565 | Not Available | Positive | 2075750 - 2076001 | 9308.13 |
| toxin | NCTC9117_02566 | Not Available | Positive | 2075998 - 2076252 | 10216.1 |
| protein yeez | NCTC9117_02567 | Not Available | Positive | 2076335 - 2077159 | 29681.7 |
| lysr family transcriptional regulator | NCTC9117_02568 | Not Available | Positive | 2077184 - 2078134 | 34920.0 |
| putative amino acid permease | NCTC9117_02570 | Not Available | Positive | 2078401 - 2079759 | 49540.5 |
| inner membrane protein | NCTC9117_02571 | Not Available | Positive | 2079938 - 2080996 | 38044.6 |
| sira family protein | NCTC9117_02572 | Not Available | Positive | 2081010 - 2081237 | 8092.61 |
| exodeoxyribonuclease i | NCTC9117_02573 | Not Available | Negative | 2081280 - 2082707 | 54489.6 |
| penicillin-binding protein 6b | NCTC9117_02574 | Not Available | Positive | 2082896 - 2084062 | 43304.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




