Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase family protein | NCTC9117_02522 | Not Available | Positive | 2035564 - 2036310 | 27920.5 |
| colanic acid biosynthesis acetyltransferase wcaf | NCTC9117_02523 | Not Available | Positive | 2036326 - 2036847 | 18994.0 |
| gdp-mannose 4,6-dehydratase | NCTC9117_02524 | Not Available | Positive | 2036899 - 2037501 | 22913.1 |
| gdp-l-fucose synthetase | NCTC9117_02525 | Not Available | Positive | 2037558 - 2038988 | 53338.9 |
| gdp-mannose mannosyl hydrolase | NCTC9117_02526 | Not Available | Positive | 2038988 - 2039470 | 18410.8 |
| putative colanic acid biosynthesis glycosyl transferase | NCTC9117_02527 | Not Available | Positive | 2039467 - 2040741 | 46815.8 |
| mannose-1-phosphate guanylyltransferase | NCTC9117_02528 | Not Available | Positive | 2040692 - 2042128 | 52990.1 |
| phosphomannomutase cpsg | NCTC9117_02529 | Not Available | Positive | 2042322 - 2043692 | 50334.3 |
| putative colanic biosynthesis udp-glucose lipid carrier transferase | NCTC9117_02530 | Not Available | Positive | 2043886 - 2045142 | 47145.0 |
| putative flippase (putative export protein) | NCTC9117_02531 | Not Available | Positive | 2045144 - 2046622 | 53614.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




