Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional repressor rcnr | NCTC9117_02446 | Not Available | Positive | 1967832 - 1968104 | 10134.5 |
| integrase | NCTC9117_02448 | Not Available | Positive | 1968358 - 1969665 | 50028.9 |
| protein of uncharacterised function duf262 | NCTC9117_02449 | Not Available | Positive | 1969765 - 1971336 | 58579.2 |
| uncharacterised protein | NCTC9117_02450 | Not Available | Negative | 1971725 - 1972072 | 12485.1 |
| transcriptional regulator | NCTC9117_02451 | Not Available | Positive | 1972183 - 1972647 | 17426.6 |
| resolvase domain-containing protein | NCTC9117_02452 | Not Available | Negative | 1972814 - 1973353 | 19920.2 |
| uncharacterised protein | NCTC9117_02453 | Not Available | Positive | 1975342 - 1975530 | 7365.9 |
| uncharacterised protein | NCTC9117_02454 | Not Available | Positive | 1975505 - 1975720 | 8507.31 |
| uncharacterised protein | NCTC9117_02455 | Not Available | Positive | 1975775 - 1976395 | 23286.6 |
| ybl103 | NCTC9117_02456 | Not Available | Negative | 1976634 - 1976891 | 9542.51 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




