Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydropyrimidine dehydrogenase | NCTC9117_02385 | Not Available | Negative | 1916398 - 1917591 | 43511.7 |
| putative oxidoreductase | NCTC9117_02386 | Not Available | Negative | 1917585 - 1918823 | 44332.0 |
| inner membrane protein | NCTC9117_02387 | Not Available | Negative | 1919017 - 1919256 | 9264.61 |
| vancomycin sensitivity sana protein | NCTC9117_02388 | Not Available | Negative | 1919259 - 1919978 | 27288.5 |
| cytidine deaminase | NCTC9117_02389 | Not Available | Negative | 1920127 - 1921011 | 31541.6 |
| membrane protein lrgb-like family | NCTC9117_02390 | Not Available | Negative | 1921141 - 1921701 | 19285.2 |
| putative effector of murein hydrolase lrga | NCTC9117_02391 | Not Available | Negative | 1921868 - 1922230 | 13129.7 |
| pp_02303 | NCTC9117_02392 | Not Available | Positive | 1922465 - 1922854 | Not Available |
| pp_02304 | NCTC9117_02393 | Not Available | Positive | 1922847 - 1923017 | Not Available |
| pp_02305 | NCTC9117_02394 | Not Available | Positive | 1922971 - 1923420 | Not Available |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




