Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane porin protein c | NCTC9117_02285 | Not Available | Positive | 1839749 - 1839844 | 3184.96 |
| outer membrane porin protein c | NCTC9117_02286 | Not Available | Positive | 1840036 - 1840512 | 17244.8 |
| uncharacterised protein | NCTC9117_02287 | Not Available | Negative | 1840352 - 1840936 | 22302.5 |
| thiamine biosynthesis lipoprotein | NCTC9117_02288 | Not Available | Positive | 1840988 - 1842043 | 38594.0 |
| regulatory protein of adaptative response | NCTC9117_02289 | Not Available | Positive | 1842117 - 1843181 | 39338.0 |
| alpha-ketoglutarate-dependent dioxygenase (alkylated dna repair protein) | NCTC9117_02290 | Not Available | Positive | 1843181 - 1843831 | 24036.7 |
| abc transporter atpase/permease | NCTC9117_02291 | Not Available | Positive | 1843864 - 1845390 | 56948.7 |
| malate:quinone oxidoreductase | NCTC9117_02292 | Not Available | Positive | 1845766 - 1845942 | 6072.46 |
| malate:quinone oxidoreductase | NCTC9117_02293 | Not Available | Positive | 1845939 - 1846316 | 13946.8 |
| malate:quinone oxidoreductase | NCTC9117_02294 | Not Available | Positive | 1846268 - 1846777 | 19173.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




