Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyl phosphate-alpha-4-amino-4-deoxy-l-arabinose arabinosyl transferase | NCTC9117_02224 | Not Available | Negative | 1779191 - 1780822 | 61571.1 |
| putative polysaccharide deacetylase | NCTC9117_02225 | Not Available | Negative | 1780822 - 1781712 | 33113.6 |
| bifunctional polymyxin resistance protein | NCTC9117_02226 | Not Available | Negative | 1781843 - 1783690 | 68828.4 |
| undecaprenyl phosphate 4-deoxy-4-formamido-l-arabinose transferase | NCTC9117_02227 | Not Available | Negative | 1783690 - 1784658 | 36341.3 |
| udp-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferase | NCTC9117_02228 | Not Available | Negative | 1784662 - 1785819 | 42240.0 |
| is1 transposase | NCTC9117_02229 | Not Available | Positive | 1786205 - 1786480 | 9868.96 |
| is1 transposase | NCTC9117_02230 | Not Available | Positive | 1786525 - 1786902 | 14862.1 |
| phosphoglycerate mutase | NCTC9117_02231 | Not Available | Positive | 1786904 - 1787488 | 21590.9 |
| nudix-family hydrolase | NCTC9117_02232 | Not Available | Negative | 1787527 - 1787952 | 16371.6 |
| outer membrane porin protein | NCTC9117_02233 | Not Available | Positive | 1788231 - 1788773 | 18610.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




