Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine-arginine-ornithine-binding periplasmic protein | NCTC9117_02154 | Not Available | Positive | 1723959 - 1724741 | 27993.1 |
| histidine abc transporter, substrate-binding periplasmic protein | NCTC9117_02155 | Not Available | Positive | 1724962 - 1725744 | 28484.9 |
| histidine abc transporter permease | NCTC9117_02156 | Not Available | Positive | 1725834 - 1726481 | 23104.0 |
| histidine transport system permease hism | NCTC9117_02157 | Not Available | Positive | 1726518 - 1727234 | 26871.3 |
| histidine/lysine/arginine/ornithine transporter subunit | NCTC9117_02158 | Not Available | Positive | 1727242 - 1728000 | 27891.8 |
| transposase | NCTC9117_02159 | Not Available | Positive | 1728213 - 1729103 | 34181.5 |
| nad(p)-binding rossmann-fold domain | NCTC9117_02160 | Not Available | Negative | 1729151 - 1730044 | 32713.7 |
| d-erythro-7,8-dihydroneopterin triphosphate epimerase | NCTC9117_02161 | Not Available | Negative | 1730065 - 1730427 | 14082.8 |
| putative glutathione s-transferase | NCTC9117_02162 | Not Available | Negative | 1730699 - 1731130 | 16064.8 |
| putative glutathione s-transferase | NCTC9117_02163 | Not Available | Positive | 1731266 - 1731910 | 24327.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




