Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase-4 component b | NCTC9117_01954 | Not Available | Negative | 1564028 - 1565419 | 49858.8 |
| hydrogenase 4 subunit b | NCTC9117_01955 | Not Available | Negative | 1565374 - 1566045 | 24810.2 |
| hydrogenase 4 fe-s subunit | NCTC9117_01956 | Not Available | Negative | 1566045 - 1566662 | 22252.7 |
| thioredoxin-dependent thiol peroxidase | NCTC9117_01957 | Not Available | Negative | 1566915 - 1567385 | 17634.9 |
| glycine cleavage system transcriptional repressor | NCTC9117_01958 | Not Available | Negative | 1567385 - 1567957 | 20769.8 |
| dihydrodipicolinate synthase | NCTC9117_01959 | Not Available | Positive | 1568103 - 1568981 | 31285.9 |
| lipoprotein | NCTC9117_01960 | Not Available | Positive | 1568998 - 1570032 | 36844.5 |
| uncharacterised protein | NCTC9117_01961 | Not Available | Negative | 1569943 - 1570173 | 8789.6 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | NCTC9117_01962 | Not Available | Positive | 1570245 - 1570748 | 19075.1 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | NCTC9117_01963 | Not Available | Positive | 1570845 - 1570958 | 4283.16 |
Pathways
850 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




