Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylaminoimidazole synthetase | NCTC9117_01934 | Not Available | Negative | 1545631 - 1545867 | 8784.43 |
| phosphoribosylaminoimidazole synthetase | NCTC9117_01935 | Not Available | Negative | 1545864 - 1546667 | 28296.1 |
| uracil phosphoribosyltransferase | NCTC9117_01936 | Not Available | Positive | 1546992 - 1547618 | 22534.6 |
| uracil transporter | NCTC9117_01937 | Not Available | Positive | 1547783 - 1548991 | 42035.2 |
| dnaa family protein hda | NCTC9117_01938 | Not Available | Positive | 1549111 - 1549788 | 25809.2 |
| putative glutaredoxin | NCTC9117_01939 | Not Available | Negative | 1549904 - 1550284 | 14447.7 |
| putative peptidase | NCTC9117_01940 | Not Available | Negative | 1550305 - 1551768 | 53911.1 |
| putative permease | NCTC9117_01941 | Not Available | Positive | 1551981 - 1553042 | 39224.9 |
| formate transporter focb | NCTC9117_01942 | Not Available | Negative | 1553080 - 1553928 | 30566.4 |
| 2-component regulator | NCTC9117_01943 | Not Available | Negative | 1553950 - 1555962 | 75309.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




