Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCTC9117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262862 bp
Thymine Count
1261609 bp
Guanine Count
1303635 bp
Cytosine Count
1297581 bp
Genome Length
5125687 bp
Protein-coding Genes
5603 genes
Non-Coding Genes
575 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin 2 | NCTC9117_01807 | Not Available | Negative | 1448812 - 1449231 | 15555.6 |
| methyltransferase | NCTC9117_01808 | Not Available | Positive | 1449438 - 1449845 | 15233.8 |
| methyltransferase | NCTC9117_01809 | Not Available | Positive | 1449875 - 1450381 | 18284.8 |
| uracil-dna glycosylase | NCTC9117_01810 | Not Available | Negative | 1450770 - 1451201 | 16362.5 |
| autonomous glycyl radical cofactor | NCTC9117_01811 | Not Available | Positive | 1451442 - 1451888 | 16746.7 |
| uncharacterised protein | NCTC9117_01812 | Not Available | Positive | 1452634 - 1452873 | 8725.51 |
| transcriptional regulator yfie | NCTC9117_01813 | Not Available | Positive | 1452857 - 1453291 | 16522.8 |
| uncharacterised protein | NCTC9117_01814 | Not Available | Positive | 1453520 - 1453960 | 16608.8 |
| atp-dependent rna helicase | NCTC9117_01815 | Not Available | Negative | 1453807 - 1455054 | 46443.9 |
| trna (adenine-n(6)-)-methyltransferase | NCTC9117_01816 | Not Available | Positive | 1455186 - 1455923 | 27271.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




